Earlier in the day I had a nice (2 hour!) meeting with a group (including Lee Smolin and Sabine Hossenfelder) at Perimeter who are thinking about complex systems, agent simulations and economics. They referred me to the following paper, which is excellent, and again expresses many thoughts I've had over the years in thinking about markets, financial economics, etc.
Geanakoplos is a "real" economist (James Tobin Professor at Yale) and Farmer is a Sante Fe guy who ran a hedge fund called the Prediction Company. If you are a physicist trying to understand the thinking of traditional economists, or an economist who wants to understand why physicists are often dubious about neoclassical economics, read this paper.
The virtues and vices of equilibrium and the future of financial economics
J. Doyne Farmer, John Geanakoplos
http://arxiv.org/abs/0803.2996
The use of equilibrium models in economics springs from the desire for parsimonious models of economic phenomena that take human reasoning into account. This approach has been the cornerstone of modern economic theory. We explain why this is so, extolling the virtues of equilibrium theory; then we present a critique and describe why this approach is inherently limited, and why economics needs to move in new directions if it is to continue to make progress. We stress that this shouldn't be a question of dogma, but should be resolved empirically. There are situations where equilibrium models provide useful predictions and there are situations where they can never provide useful predictions. There are also many situations where the jury is still out, i.e., where so far they fail to provide a good description of the world, but where proper extensions might change this. Our goal is to convince the skeptics that equilibrium models can be useful, but also to make traditional economists more aware of the limitations of equilibrium models. We sketch some alternative approaches and discuss why they should play an important role in future research in economics.